Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.16■□□□□ 0.82
RTCAO00442 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.16■□□□□ 0.82
RTCAO00442 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.16■□□□□ 0.82
RTCAO00442 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.16■□□□□ 0.82
RTCAO00442 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
RTCAO00442 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.15■□□□□ 0.82
RTCAO00442 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 AF106564.1-201ENST00000607058 2553 ntBASIC20.15■□□□□ 0.82
RTCAO00442 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.15■□□□□ 0.82
RTCAO00442 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.15■□□□□ 0.82
RTCAO00442 YBX1P1-201ENST00000445822 960 ntBASIC20.15■□□□□ 0.82
RTCAO00442 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.15■□□□□ 0.82
RTCAO00442 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RTCAO00442 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.15■□□□□ 0.82
RTCAO00442 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 LINC02228-203ENST00000641970 1355 ntBASIC20.15■□□□□ 0.82
RTCAO00442 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.15■□□□□ 0.82
RTCAO00442 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTCAO00442 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RTCAO00442 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTCAO00442 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTCAO00442 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTCAO00442 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
RTCAO00442 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTCAO00442 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RTCAO00442 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RTCAO00442 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTCAO00442 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.14■□□□□ 0.81
RTCAO00442 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.14■□□□□ 0.81
RTCAO00442 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTCAO00442 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.14■□□□□ 0.81
RTCAO00442 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.13■□□□□ 0.81
RTCAO00442 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RTCAO00442 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.13■□□□□ 0.81
RTCAO00442 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTCAO00442 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.13■□□□□ 0.81
RTCAO00442 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.13■□□□□ 0.81
RTCAO00442 AC019069.1-201ENST00000610008 1333 ntBASIC20.13■□□□□ 0.81
RTCAO00442 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.13■□□□□ 0.81
RTCAO00442 AC079140.4-201ENST00000507448 529 ntBASIC20.13■□□□□ 0.81
RTCAO00442 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.13■□□□□ 0.81
RTCAO00442 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.13■□□□□ 0.81
RTCAO00442 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.13■□□□□ 0.81
RTCAO00442 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.13■□□□□ 0.81
RTCAO00442 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTCAO00442 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RTCAO00442 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTCAO00442 AC005229.4-201ENST00000610085 2198 ntBASIC20.12■□□□□ 0.81
RTCAO00442 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTCAO00442 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTCAO00442 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTCAO00442 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.12■□□□□ 0.81
RTCAO00442 AC123595.1-201ENST00000440769 1046 ntBASIC20.12■□□□□ 0.81
RTCAO00442 CCDC92B-201ENST00000575506 885 ntBASIC20.12■□□□□ 0.81
RTCAO00442 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.12■□□□□ 0.81
RTCAO00442 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.12■□□□□ 0.81
RTCAO00442 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTCAO00442 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.12■□□□□ 0.81
RTCAO00442 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTCAO00442 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTCAO00442 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.11■□□□□ 0.81
RTCAO00442 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTCAO00442 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RTCAO00442 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.11■□□□□ 0.81
RTCAO00442 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.11■□□□□ 0.81
RTCAO00442 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.11■□□□□ 0.81
RTCAO00442 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.11■□□□□ 0.81
RTCAO00442 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms