Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 AC003102.1-202ENST00000563394 1796 ntBASIC19.52■□□□□ 0.72
TNFRSF11BO00300 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF11BO00300 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFRSF11BO00300 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.71
TNFRSF11BO00300 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.71
TNFRSF11BO00300 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TNFRSF11BO00300 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.52■□□□□ 0.71
TNFRSF11BO00300 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.52■□□□□ 0.71
TNFRSF11BO00300 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF11BO00300 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 AP004607.7-201ENST00000527152 1677 ntBASIC19.5■□□□□ 0.71
TNFRSF11BO00300 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 RARRES2P1-201ENST00000474487 481 ntBASIC19.5■□□□□ 0.71
TNFRSF11BO00300 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 AC092667.1-201ENST00000434301 2586 ntBASIC19.5■□□□□ 0.71
TNFRSF11BO00300 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF11BO00300 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF11BO00300 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 AC010525.1-201ENST00000585559 441 ntBASIC19.48■□□□□ 0.71
TNFRSF11BO00300 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF11BO00300 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms