Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 KRT18P20-201ENST00000548986 1279 ntBASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 AC003102.1-202ENST00000563394 1796 ntBASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 AC008175.2-201ENST00000612840 297 ntBASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 AC120498.10-201ENST00000621827 505 ntBASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SMIM9A6NGZ8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 SLC25A24-204ENST00000569674 2357 ntBASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 POU5F1P4-201ENST00000413175 1085 ntBASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 KRT18P11-201ENST00000435214 1283 ntBASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM9A6NGZ8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 AC004854.2-201ENST00000608450 1441 ntBASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.28■□□□□ 0.04
SMIM9A6NGZ8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 AC010141.2-201ENST00000452426 721 ntBASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 AC104187.1-201ENST00000607510 612 ntBASIC15.27■□□□□ 0.04
SMIM9A6NGZ8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM9A6NGZ8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM9A6NGZ8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.27■□□□□ 0.03
SMIM9A6NGZ8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM9A6NGZ8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms