Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 PLK5-205ENST00000642079 1969 ntBASIC17.24■□□□□ 0.35
RNF222A6NCQ9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 AC020907.5-201ENST00000624372 1936 ntBASIC17.23■□□□□ 0.35
RNF222A6NCQ9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF222A6NCQ9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF222A6NCQ9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RNF222A6NCQ9 AC116562.4-201ENST00000641316 2276 ntBASIC17.21■□□□□ 0.34
RNF222A6NCQ9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.21■□□□□ 0.34
RNF222A6NCQ9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 ABHD17AP4-201ENST00000411545 909 ntBASIC17.2■□□□□ 0.34
RNF222A6NCQ9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 MIR6765-201ENST00000614092 87 ntBASIC17.2■□□□□ 0.34
RNF222A6NCQ9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF222A6NCQ9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 AL162377.1-201ENST00000618844 1793 ntBASIC17.19■□□□□ 0.34
RNF222A6NCQ9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms