Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3D21A4FU49 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3D21A4FU49 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3D21A4FU49 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3D21A4FU49 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3D21A4FU49 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 SLC47A1P1-202ENST00000449666 945 ntBASIC19.55■□□□□ 0.72
SH3D21A4FU49 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3D21A4FU49 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SH3D21A4FU49 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SH3D21A4FU49 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SH3D21A4FU49 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SH3D21A4FU49 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.54■□□□□ 0.72
SH3D21A4FU49 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 AF106564.1-201ENST00000607058 2553 ntBASIC19.54■□□□□ 0.72
SH3D21A4FU49 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SH3D21A4FU49 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3D21A4FU49 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.54■□□□□ 0.72
SH3D21A4FU49 TSPY26P-201ENST00000476365 1326 ntBASIC19.53■□□□□ 0.72
SH3D21A4FU49 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH3D21A4FU49 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3D21A4FU49 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.53■□□□□ 0.72
SH3D21A4FU49 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.53■□□□□ 0.72
SH3D21A4FU49 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3D21A4FU49 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3D21A4FU49 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SH3D21A4FU49 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3D21A4FU49 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.53■□□□□ 0.72
SH3D21A4FU49 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SH3D21A4FU49 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3D21A4FU49 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3D21A4FU49 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH3D21A4FU49 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH3D21A4FU49 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SH3D21A4FU49 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH3D21A4FU49 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH3D21A4FU49 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.52■□□□□ 0.72
SH3D21A4FU49 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.52■□□□□ 0.72
SH3D21A4FU49 AL157384.1-201ENST00000445995 2473 ntBASIC19.52■□□□□ 0.72
SH3D21A4FU49 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH3D21A4FU49 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SH3D21A4FU49 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.52■□□□□ 0.71
SH3D21A4FU49 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH3D21A4FU49 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
SH3D21A4FU49 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH3D21A4FU49 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 AC004687.1-201ENST00000579003 1625 ntBASIC19.51■□□□□ 0.71
SH3D21A4FU49 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3D21A4FU49 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.51■□□□□ 0.71
SH3D21A4FU49 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3D21A4FU49 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms