Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 AL451085.2-201ENST00000605085 799 ntBASIC18.48■□□□□ 0.55
SHISA3A0PJX4 AC012354.3-201ENST00000623734 483 ntBASIC18.48■□□□□ 0.55
SHISA3A0PJX4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 AC027702.1-201ENST00000563810 1770 ntBASIC18.47■□□□□ 0.55
SHISA3A0PJX4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHISA3A0PJX4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.46■□□□□ 0.55
SHISA3A0PJX4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SHISA3A0PJX4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.46■□□□□ 0.54
SHISA3A0PJX4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.46■□□□□ 0.54
SHISA3A0PJX4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 AC112907.3-201ENST00000577781 2400 ntBASIC18.45■□□□□ 0.54
SHISA3A0PJX4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHISA3A0PJX4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 AC133637.1-201ENST00000624115 1537 ntBASIC18.44■□□□□ 0.54
SHISA3A0PJX4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 AL031848.2-201ENST00000607670 837 ntBASIC18.44■□□□□ 0.54
SHISA3A0PJX4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHISA3A0PJX4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 YBX1P4-201ENST00000392794 808 ntBASIC18.43■□□□□ 0.54
SHISA3A0PJX4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms