Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 BX005040.4-201ENST00000637145 1518 ntBASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV4S1A1TA0A5B7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV4S1A1TA0A5B7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 OXCT2P1-201ENST00000447263 1535 ntBASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV4S1A1TA0A5B7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AL024507.2-201ENST00000606070 2574 ntBASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms