Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV22A0A0B4J277 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV22A0A0B4J277 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 SMG8-203ENST00000578922 2178 ntBASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRAV22A0A0B4J277 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 AC087741.3-201ENST00000624270 1347 ntBASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 AP006261.1-201ENST00000584783 668 ntBASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV22A0A0B4J277 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 SSSCA1-AS1-201ENST00000567594 614 ntBASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 BCL2-203ENST00000589955 5011 ntBASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms