Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 AC093787.1-201ENST00000450396 207 ntBASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV17A0A0B4J275 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 MIR4651-201ENST00000582622 73 ntBASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV17A0A0B4J275 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 BX276092.2-201ENST00000417668 665 ntBASIC19.2■□□□□ 0.66
TRAV17A0A0B4J275 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 AC092053.2-201ENST00000640557 1818 ntBASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 RNA5SP413-201ENST00000516373 109 ntBASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 AC061975.6-201ENST00000579045 1553 ntBASIC19.19■□□□□ 0.66
TRAV17A0A0B4J275 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 RARRES2P4-201ENST00000514074 484 ntBASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 AC003102.1-202ENST00000563394 1796 ntBASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV17A0A0B4J275 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV17A0A0B4J275 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 POU5F1P3-201ENST00000428824 1078 ntBASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 AC097658.1-201ENST00000475555 843 ntBASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV17A0A0B4J275 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms