Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV4A0A0B4J268 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV4A0A0B4J268 AC026471.6-201ENST00000622954 1905 ntBASIC15.21■□□□□ 0.02
TRAV4A0A0B4J268 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TRAV4A0A0B4J268 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV4A0A0B4J268 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV4A0A0B4J268 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 AC099791.1-201ENST00000416440 715 ntBASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 SMUG1P1-201ENST00000590640 811 ntBASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV4A0A0B4J268 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 AL355001.2-201ENST00000620617 1191 ntBASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV4A0A0B4J268 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 AL137060.1-201ENST00000618151 2648 ntBASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 AP006587.3-201ENST00000525742 1516 ntBASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 Z98882.1-201ENST00000622160 2253 ntBASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 AF106564.1-201ENST00000607058 2553 ntBASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 AP001330.3-201ENST00000520123 633 ntBASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV4A0A0B4J268 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV4A0A0B4J268 AC026310.3-201ENST00000625186 2373 ntBASIC15.17■□□□□ 0.02
TRAV4A0A0B4J268 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV4A0A0B4J268 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV4A0A0B4J268 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV4A0A0B4J268 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV4A0A0B4J268 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms