Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 AL138724.1-201ENST00000606771 1088 ntBASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-4A0A0B4J246 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 AC087239.1-201ENST00000622671 572 ntBASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-4A0A0B4J246 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 AL512631.2-201ENST00000604634 923 ntBASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-4A0A0B4J246 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-4A0A0B4J246 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 MIR3181-201ENST00000578512 73 ntBASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms