Protein–RNA interactions for Protein: A0A0B4J1U7

IGHV6-1, Immunoglobulin heavy variable 6-1, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV6-1A0A0B4J1U7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 HTR7P1-202ENST00000624664 4411 ntBASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 FEM1AP4-201ENST00000443167 1987 ntBASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 DUX4L4-201ENST00000566884 1269 ntBASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
IGHV6-1A0A0B4J1U7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC010980.1-201ENST00000587192 1142 ntBASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 LINC01521-201ENST00000504184 1943 ntBASIC12.23□□□□□ -0.45
IGHV6-1A0A0B4J1U7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms