Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC009237.3-201ENST00000393279 1427 ntBASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC099791.1-201ENST00000416440 715 ntBASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 EDA-201ENST00000338901 1233 ntBASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC106739.1-201ENST00000617035 715 ntBASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC105233.4-201ENST00000642045 216 ntBASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-8A0A0A6YYG3 TSPY26P-201ENST00000476365 1326 ntBASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms