Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 AC004448.1-201ENST00000458332 883 ntBASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV6A0A075B6T7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV6A0A075B6T7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 AC009086.3-201ENST00000623486 1008 ntBASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV6A0A075B6T7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV6A0A075B6T7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV6A0A075B6T7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 SPCS2P3-201ENST00000500401 656 ntBASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV6A0A075B6T7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRAV6A0A075B6T7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms