Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX49Q9Y6V7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 KRT18P5-201ENST00000436075 1291 ntBASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 YBX1P1-201ENST00000445822 960 ntBASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
DDX49Q9Y6V7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX49Q9Y6V7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 LINC01529-204ENST00000636474 1715 ntBASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.29■■□□□ 1.64
DDX49Q9Y6V7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 AC244015.2-201ENST00000616358 1861 ntBASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 MIR572-201ENST00000384983 95 ntBASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 FP325331.1-202ENST00000623531 1380 ntBASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX49Q9Y6V7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 AC034268.1-201ENST00000441047 882 ntBASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 OR2I1P-207ENST00000453522 948 ntBASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 AC012414.1-201ENST00000556676 535 ntBASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 AC022517.1-201ENST00000592429 346 ntBASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX49Q9Y6V7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms