Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 SLC25A24-204ENST00000569674 2357 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 AC079140.4-201ENST00000507448 529 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4L2-201ENST00000561772 1275 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4L6-201ENST00000626483 1275 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4L1-201ENST00000627662 1275 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4L8-201ENST00000629013 1275 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4L3-201ENST00000630187 1275 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4L7-201ENST00000630678 1275 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 DUX4L5-201ENST00000630834 1275 ntBASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLCA3PQ9Y6N3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCA3PQ9Y6N3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 AP006587.3-201ENST00000525742 1516 ntBASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLCA3PQ9Y6N3 AC055733.4-201ENST00000638462 1354 ntBASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCA3PQ9Y6N3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CLCA3PQ9Y6N3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
CLCA3PQ9Y6N3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms