Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNE3Q9Y6H6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 AC009237.3-201ENST00000393279 1427 ntBASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 AC005224.4-201ENST00000583262 1652 ntBASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
KCNE3Q9Y6H6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 MIR638-201ENST00000385237 100 ntBASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNE3Q9Y6H6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 AC012414.1-201ENST00000556676 535 ntBASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNE3Q9Y6H6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNE3Q9Y6H6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 AC105265.2-201ENST00000467189 838 ntBASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 MIR6084-201ENST00000622012 110 ntBASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCNE3Q9Y6H6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms