Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 LSM12P1-201ENST00000411836 588 ntBASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 AC120498.10-201ENST00000621827 505 ntBASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCH2Q9Y6C5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 CYP2T3P-201ENST00000601990 817 ntBASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 LINC01124-201ENST00000409786 2117 ntBASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PTCH2Q9Y6C5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PTCH2Q9Y6C5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCH2Q9Y6C5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PTCH2Q9Y6C5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PTCH2Q9Y6C5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 RBM17P2-201ENST00000616397 1405 ntBASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCH2Q9Y6C5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 AC008175.2-201ENST00000612840 297 ntBASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCH2Q9Y6C5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 AC060766.5-201ENST00000590539 871 ntBASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
PTCH2Q9Y6C5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 KRT17P1-201ENST00000399211 1546 ntBASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCH2Q9Y6C5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms