Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AL158047.1-201ENST00000445918 881 ntBASIC19.25■□□□□ 0.67
SHANK1Q9Y566 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 AC091874.3-201ENST00000512672 1195 ntBASIC19.25■□□□□ 0.67
SHANK1Q9Y566 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.25■□□□□ 0.67
SHANK1Q9Y566 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHANK1Q9Y566 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 ESRRAP1-201ENST00000400596 1257 ntBASIC19.23■□□□□ 0.67
SHANK1Q9Y566 AC093787.1-201ENST00000450396 207 ntBASIC19.23■□□□□ 0.67
SHANK1Q9Y566 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 AP004607.7-201ENST00000527152 1677 ntBASIC19.23■□□□□ 0.67
SHANK1Q9Y566 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 LINC01960-201ENST00000563759 1884 ntBASIC19.23■□□□□ 0.67
SHANK1Q9Y566 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.23■□□□□ 0.67
SHANK1Q9Y566 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 AC006058.3-201ENST00000606217 1069 ntBASIC19.22■□□□□ 0.67
SHANK1Q9Y566 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHANK1Q9Y566 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 AP006294.2-201ENST00000641667 209 ntBASIC19.21■□□□□ 0.67
SHANK1Q9Y566 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHANK1Q9Y566 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
SHANK1Q9Y566 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHANK1Q9Y566 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms