Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH1Q9Y2L9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 AC098818.2-201ENST00000564925 2320 ntBASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 BHLHE23-202ENST00000612929 1109 ntBASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 AC026471.1-201ENST00000564629 3026 ntBASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRCH1Q9Y2L9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.09■□□□□ 0.81
LRCH1Q9Y2L9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH1Q9Y2L9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.08■□□□□ 0.81
LRCH1Q9Y2L9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRCH1Q9Y2L9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH1Q9Y2L9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH1Q9Y2L9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRCH1Q9Y2L9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.08■□□□□ 0.8
LRCH1Q9Y2L9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH1Q9Y2L9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 LETM1P2-201ENST00000597330 2178 ntBASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms