Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SAMD4AQ9UPU9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 AC099791.2-201ENST00000605725 427 ntBASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SAMD4AQ9UPU9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.78■□□□□ 0.76
SAMD4AQ9UPU9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 AC003102.1-202ENST00000563394 1796 ntBASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAMD4AQ9UPU9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SAMD4AQ9UPU9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SAMD4AQ9UPU9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 MIR3181-201ENST00000578512 73 ntBASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SAMD4AQ9UPU9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.75■□□□□ 0.75
SAMD4AQ9UPU9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms