Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.32■■□□□ 1.96
CCNL1Q9UK58 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCNL1Q9UK58 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.32■■□□□ 1.96
CCNL1Q9UK58 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCNL1Q9UK58 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 LSM12P1-201ENST00000411836 588 ntBASIC27.3■■□□□ 1.96
CCNL1Q9UK58 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCNL1Q9UK58 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 KRT16P2-201ENST00000414673 1423 ntBASIC27.29■■□□□ 1.96
CCNL1Q9UK58 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCNL1Q9UK58 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCNL1Q9UK58 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCNL1Q9UK58 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.28■■□□□ 1.96
CCNL1Q9UK58 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.28■■□□□ 1.96
CCNL1Q9UK58 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.28■■□□□ 1.96
CCNL1Q9UK58 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC27.28■■□□□ 1.96
CCNL1Q9UK58 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC27.28■■□□□ 1.96
CCNL1Q9UK58 AC008403.3-201ENST00000598924 454 ntBASIC27.28■■□□□ 1.96
CCNL1Q9UK58 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 ANOS2P-203ENST00000472227 1816 ntBASIC27.27■■□□□ 1.96
CCNL1Q9UK58 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCNL1Q9UK58 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 AC243732.1-201ENST00000612648 864 ntBASIC27.26■■□□□ 1.95
CCNL1Q9UK58 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCNL1Q9UK58 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCNL1Q9UK58 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCNL1Q9UK58 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCNL1Q9UK58 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCNL1Q9UK58 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCNL1Q9UK58 MIR718-201ENST00000390190 70 ntBASIC27.23■■□□□ 1.95
CCNL1Q9UK58 ECEL1P3-201ENST00000427961 737 ntBASIC27.23■■□□□ 1.95
CCNL1Q9UK58 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC27.23■■□□□ 1.95
CCNL1Q9UK58 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC27.23■■□□□ 1.95
CCNL1Q9UK58 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms