Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CISHQ9NSE2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CISHQ9NSE2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.66■■□□□ 1.22
CISHQ9NSE2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.66■■□□□ 1.22
CISHQ9NSE2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.66■■□□□ 1.22
CISHQ9NSE2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.66■■□□□ 1.22
CISHQ9NSE2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CISHQ9NSE2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.66■■□□□ 1.22
CISHQ9NSE2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CISHQ9NSE2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.66■■□□□ 1.22
CISHQ9NSE2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 EEF1DP3-203ENST00000566025 782 ntBASIC22.65■■□□□ 1.22
CISHQ9NSE2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.65■■□□□ 1.22
CISHQ9NSE2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CISHQ9NSE2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CISHQ9NSE2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CISHQ9NSE2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CISHQ9NSE2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CISHQ9NSE2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 MIR935-201ENST00000401179 91 ntBASIC22.64■■□□□ 1.21
CISHQ9NSE2 AC034268.1-201ENST00000441047 882 ntBASIC22.64■■□□□ 1.21
CISHQ9NSE2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CISHQ9NSE2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CISHQ9NSE2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CISHQ9NSE2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.63■■□□□ 1.21
CISHQ9NSE2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.63■■□□□ 1.21
CISHQ9NSE2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.63■■□□□ 1.21
CISHQ9NSE2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.63■■□□□ 1.21
CISHQ9NSE2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CISHQ9NSE2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.62■■□□□ 1.21
CISHQ9NSE2 AC053503.5-201ENST00000601508 636 ntBASIC22.62■■□□□ 1.21
CISHQ9NSE2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.62■■□□□ 1.21
CISHQ9NSE2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CISHQ9NSE2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms