Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 AC003102.1-202ENST00000563394 1796 ntBASIC19.68■□□□□ 0.74
POLE3Q9NRF9 SUDS3P1-201ENST00000505831 966 ntBASIC19.68■□□□□ 0.74
POLE3Q9NRF9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLE3Q9NRF9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 Z98882.1-201ENST00000622160 2253 ntBASIC19.67■□□□□ 0.74
POLE3Q9NRF9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLE3Q9NRF9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLE3Q9NRF9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 BX005040.4-201ENST00000637145 1518 ntBASIC19.65■□□□□ 0.74
POLE3Q9NRF9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
POLE3Q9NRF9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.64■□□□□ 0.74
POLE3Q9NRF9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
POLE3Q9NRF9 AC026310.3-201ENST00000625186 2373 ntBASIC19.64■□□□□ 0.74
POLE3Q9NRF9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
POLE3Q9NRF9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLE3Q9NRF9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 AC007375.3-201ENST00000600936 2314 ntBASIC19.63■□□□□ 0.73
POLE3Q9NRF9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLE3Q9NRF9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.62■□□□□ 0.73
POLE3Q9NRF9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms