Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 AC144652.1-201ENST00000609974 1624 ntBASIC19.17■□□□□ 0.66
HMG20AQ9NP66 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20AQ9NP66 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20AQ9NP66 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 AFG3L1P-217ENST00000557444 2447 ntBASIC19.15■□□□□ 0.66
HMG20AQ9NP66 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20AQ9NP66 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMG20AQ9NP66 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMG20AQ9NP66 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 AL031848.2-201ENST00000607670 837 ntBASIC19.14■□□□□ 0.65
HMG20AQ9NP66 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMG20AQ9NP66 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 AC137630.3-201ENST00000607245 391 ntBASIC19.13■□□□□ 0.65
HMG20AQ9NP66 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.13■□□□□ 0.65
HMG20AQ9NP66 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms