Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 AC007952.6-201ENST00000573168 2673 ntBASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 AC003957.1-201ENST00000625108 2673 ntBASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 AC099791.2-201ENST00000605725 427 ntBASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMSS1Q9BQ75 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 KRT16P3-201ENST00000439127 1283 ntBASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CMSS1Q9BQ75 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMSS1Q9BQ75 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CMSS1Q9BQ75 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.02■□□□□ 0.47
CMSS1Q9BQ75 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CMSS1Q9BQ75 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CMSS1Q9BQ75 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CMSS1Q9BQ75 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CMSS1Q9BQ75 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMSS1Q9BQ75 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMSS1Q9BQ75 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 AL356740.2-201ENST00000601559 647 ntBASIC18■□□□□ 0.47
CMSS1Q9BQ75 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMSS1Q9BQ75 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMSS1Q9BQ75 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
CMSS1Q9BQ75 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18■□□□□ 0.47
CMSS1Q9BQ75 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 OR2I1P-207ENST00000453522 948 ntBASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms