Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE1Q99829 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE1Q99829 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 SMUG1P1-201ENST00000590640 811 ntBASIC21.17■□□□□ 0.98
CPNE1Q99829 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.17■□□□□ 0.98
CPNE1Q99829 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE1Q99829 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE1Q99829 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CPNE1Q99829 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE1Q99829 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE1Q99829 AL136116.3-201ENST00000402907 1138 ntBASIC21.16■□□□□ 0.98
CPNE1Q99829 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE1Q99829 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE1Q99829 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.16■□□□□ 0.98
CPNE1Q99829 AC133561.4-201ENST00000566112 224 ntBASIC21.16■□□□□ 0.98
CPNE1Q99829 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE1Q99829 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE1Q99829 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.16■□□□□ 0.98
CPNE1Q99829 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPNE1Q99829 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
CPNE1Q99829 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE1Q99829 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CPNE1Q99829 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CPNE1Q99829 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE1Q99829 MIR4767-201ENST00000582827 78 ntBASIC21.15■□□□□ 0.98
CPNE1Q99829 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.15■□□□□ 0.98
CPNE1Q99829 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE1Q99829 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE1Q99829 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE1Q99829 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE1Q99829 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CPNE1Q99829 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.14■□□□□ 0.98
CPNE1Q99829 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CPNE1Q99829 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE1Q99829 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.14■□□□□ 0.97
CPNE1Q99829 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE1Q99829 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE1Q99829 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE1Q99829 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE1Q99829 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CPNE1Q99829 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CPNE1Q99829 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE1Q99829 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE1Q99829 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE1Q99829 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE1Q99829 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms