Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
BBS4Q96RK4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.08■□□□□ 0.81
BBS4Q96RK4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.08■□□□□ 0.81
BBS4Q96RK4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BBS4Q96RK4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BBS4Q96RK4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BBS4Q96RK4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
BBS4Q96RK4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS4Q96RK4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS4Q96RK4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.07■□□□□ 0.8
BBS4Q96RK4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.07■□□□□ 0.8
BBS4Q96RK4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
BBS4Q96RK4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS4Q96RK4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS4Q96RK4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.07■□□□□ 0.8
BBS4Q96RK4 AC005837.3-201ENST00000612163 286 ntBASIC20.07■□□□□ 0.8
BBS4Q96RK4 AC009237.3-201ENST00000393279 1427 ntBASIC20.07■□□□□ 0.8
BBS4Q96RK4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS4Q96RK4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS4Q96RK4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.07■□□□□ 0.8
BBS4Q96RK4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS4Q96RK4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.07■□□□□ 0.8
BBS4Q96RK4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS4Q96RK4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS4Q96RK4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
BBS4Q96RK4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS4Q96RK4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.06■□□□□ 0.8
BBS4Q96RK4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.06■□□□□ 0.8
BBS4Q96RK4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
BBS4Q96RK4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.06■□□□□ 0.8
BBS4Q96RK4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.06■□□□□ 0.8
BBS4Q96RK4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS4Q96RK4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS4Q96RK4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.06■□□□□ 0.8
BBS4Q96RK4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS4Q96RK4 AC003102.1-202ENST00000563394 1796 ntBASIC20.06■□□□□ 0.8
BBS4Q96RK4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.05■□□□□ 0.8
BBS4Q96RK4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS4Q96RK4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS4Q96RK4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.05■□□□□ 0.8
BBS4Q96RK4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BBS4Q96RK4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.05■□□□□ 0.8
BBS4Q96RK4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS4Q96RK4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS4Q96RK4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BBS4Q96RK4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
BBS4Q96RK4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS4Q96RK4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BBS4Q96RK4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS4Q96RK4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
BBS4Q96RK4 Z98882.1-201ENST00000622160 2253 ntBASIC20.04■□□□□ 0.8
BBS4Q96RK4 BX005040.4-201ENST00000637145 1518 ntBASIC20.04■□□□□ 0.8
BBS4Q96RK4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS4Q96RK4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.04■□□□□ 0.8
BBS4Q96RK4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.04■□□□□ 0.8
BBS4Q96RK4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS4Q96RK4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS4Q96RK4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
BBS4Q96RK4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS4Q96RK4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS4Q96RK4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BBS4Q96RK4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.04■□□□□ 0.8
BBS4Q96RK4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
BBS4Q96RK4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS4Q96RK4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS4Q96RK4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS4Q96RK4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BBS4Q96RK4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 AC026310.3-201ENST00000625186 2373 ntBASIC20.03■□□□□ 0.8
BBS4Q96RK4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BBS4Q96RK4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
BBS4Q96RK4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS4Q96RK4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS4Q96RK4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BBS4Q96RK4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.02■□□□□ 0.8
BBS4Q96RK4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BBS4Q96RK4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.02■□□□□ 0.8
BBS4Q96RK4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
BBS4Q96RK4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BBS4Q96RK4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.02■□□□□ 0.8
BBS4Q96RK4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.02■□□□□ 0.8
BBS4Q96RK4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.02■□□□□ 0.8
BBS4Q96RK4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BBS4Q96RK4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BBS4Q96RK4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
BBS4Q96RK4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BBS4Q96RK4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BBS4Q96RK4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BBS4Q96RK4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.01■□□□□ 0.79
BBS4Q96RK4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BBS4Q96RK4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms