Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 TSPY6P-201ENST00000448518 926 ntBASIC17.24■□□□□ 0.35
ZNF48Q96MX3 AC010141.2-201ENST00000452426 721 ntBASIC17.24■□□□□ 0.35
ZNF48Q96MX3 SLC7A5P2-201ENST00000553010 536 ntBASIC17.24■□□□□ 0.35
ZNF48Q96MX3 AC142086.2-201ENST00000569753 217 ntBASIC17.24■□□□□ 0.35
ZNF48Q96MX3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 CNN2P6-201ENST00000439038 900 ntBASIC17.23■□□□□ 0.35
ZNF48Q96MX3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 AC138907.5-202ENST00000569484 235 ntBASIC17.23■□□□□ 0.35
ZNF48Q96MX3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF48Q96MX3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF48Q96MX3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 AL138781.1-201ENST00000566567 1274 ntBASIC17.21■□□□□ 0.35
ZNF48Q96MX3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF48Q96MX3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF48Q96MX3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF48Q96MX3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF48Q96MX3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms