Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AP006587.3-201ENST00000525742 1516 ntBASIC22.4■■□□□ 1.18
CALR3Q96L12 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.4■■□□□ 1.18
CALR3Q96L12 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CALR3Q96L12 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.39■■□□□ 1.18
CALR3Q96L12 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CALR3Q96L12 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.39■■□□□ 1.17
CALR3Q96L12 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CALR3Q96L12 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
CALR3Q96L12 SLC47A1P1-202ENST00000449666 945 ntBASIC22.39■■□□□ 1.17
CALR3Q96L12 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CALR3Q96L12 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CALR3Q96L12 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.39■■□□□ 1.17
CALR3Q96L12 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.38■■□□□ 1.17
CALR3Q96L12 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.38■■□□□ 1.17
CALR3Q96L12 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CALR3Q96L12 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.38■■□□□ 1.17
CALR3Q96L12 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CALR3Q96L12 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.37■■□□□ 1.17
CALR3Q96L12 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.37■■□□□ 1.17
CALR3Q96L12 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.37■■□□□ 1.17
CALR3Q96L12 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.37■■□□□ 1.17
CALR3Q96L12 AL356441.2-201ENST00000443009 864 ntBASIC22.37■■□□□ 1.17
CALR3Q96L12 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.37■■□□□ 1.17
CALR3Q96L12 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.37■■□□□ 1.17
CALR3Q96L12 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CALR3Q96L12 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CALR3Q96L12 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CALR3Q96L12 AL157384.1-201ENST00000445995 2473 ntBASIC22.36■■□□□ 1.17
CALR3Q96L12 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.36■■□□□ 1.17
CALR3Q96L12 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.36■■□□□ 1.17
CALR3Q96L12 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.36■■□□□ 1.17
CALR3Q96L12 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CALR3Q96L12 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CALR3Q96L12 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
CALR3Q96L12 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CALR3Q96L12 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.35■■□□□ 1.17
CALR3Q96L12 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CALR3Q96L12 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.35■■□□□ 1.17
CALR3Q96L12 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.35■■□□□ 1.17
CALR3Q96L12 MIR4466-201ENST00000606121 54 ntBASIC22.35■■□□□ 1.17
CALR3Q96L12 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CALR3Q96L12 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CALR3Q96L12 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CALR3Q96L12 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.34■■□□□ 1.17
CALR3Q96L12 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CALR3Q96L12 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CALR3Q96L12 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.34■■□□□ 1.17
CALR3Q96L12 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CALR3Q96L12 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.34■■□□□ 1.17
CALR3Q96L12 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
CALR3Q96L12 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.34■■□□□ 1.17
CALR3Q96L12 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CALR3Q96L12 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.33■■□□□ 1.17
CALR3Q96L12 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CALR3Q96L12 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.33■■□□□ 1.17
CALR3Q96L12 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CALR3Q96L12 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.33■■□□□ 1.17
CALR3Q96L12 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CALR3Q96L12 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms