Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM5Q96HC4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PDLIM5Q96HC4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM5Q96HC4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.77■□□□□ 0.92
PDLIM5Q96HC4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM5Q96HC4 AL358852.1-201ENST00000623174 1268 ntBASIC20.77■□□□□ 0.92
PDLIM5Q96HC4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM5Q96HC4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDLIM5Q96HC4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.77■□□□□ 0.91
PDLIM5Q96HC4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.77■□□□□ 0.91
PDLIM5Q96HC4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.77■□□□□ 0.91
PDLIM5Q96HC4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 AC005229.4-201ENST00000610085 2198 ntBASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDLIM5Q96HC4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM5Q96HC4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM5Q96HC4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 MIR638-201ENST00000385237 100 ntBASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM5Q96HC4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 IRS3P-201ENST00000223076 1006 ntBASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms