Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.39■□□□□ 0.86
UBE2E3Q969T4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.39■□□□□ 0.86
UBE2E3Q969T4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.39■□□□□ 0.86
UBE2E3Q969T4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBE2E3Q969T4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 Z98882.1-201ENST00000622160 2253 ntBASIC20.38■□□□□ 0.85
UBE2E3Q969T4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.38■□□□□ 0.85
UBE2E3Q969T4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE2E3Q969T4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE2E3Q969T4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2E3Q969T4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 CLDN5-201ENST00000403084 2357 ntBASIC20.35■□□□□ 0.85
UBE2E3Q969T4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.35■□□□□ 0.85
UBE2E3Q969T4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2E3Q969T4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 AC027612.3-201ENST00000413684 1047 ntBASIC20.34■□□□□ 0.85
UBE2E3Q969T4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2E3Q969T4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms