Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 AC098818.2-201ENST00000564925 2320 ntBASIC21.32■■□□□ 1
BCAS4Q8TDM0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BCAS4Q8TDM0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
BCAS4Q8TDM0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.31■■□□□ 1
BCAS4Q8TDM0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BCAS4Q8TDM0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
BCAS4Q8TDM0 C17orf82-201ENST00000623772 1530 ntBASIC21.3■■□□□ 1
BCAS4Q8TDM0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.3■■□□□ 1
BCAS4Q8TDM0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BCAS4Q8TDM0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BCAS4Q8TDM0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BCAS4Q8TDM0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
BCAS4Q8TDM0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.3■■□□□ 1
BCAS4Q8TDM0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BCAS4Q8TDM0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
BCAS4Q8TDM0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
BCAS4Q8TDM0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 BX323043.1-201ENST00000641006 1765 ntBASIC21.29■■□□□ 1
BCAS4Q8TDM0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BCAS4Q8TDM0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BCAS4Q8TDM0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BCAS4Q8TDM0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BCAS4Q8TDM0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.29■■□□□ 1
BCAS4Q8TDM0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
BCAS4Q8TDM0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
BCAS4Q8TDM0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 AC087393.1-201ENST00000582896 145 ntBASIC21.28■■□□□ 1
BCAS4Q8TDM0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
BCAS4Q8TDM0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
BCAS4Q8TDM0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.28■■□□□ 1
BCAS4Q8TDM0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.28■■□□□ 1
BCAS4Q8TDM0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 AC009086.3-201ENST00000623486 1008 ntBASIC21.27■■□□□ 1
BCAS4Q8TDM0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.27■■□□□ 1
BCAS4Q8TDM0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 AC112907.3-201ENST00000577781 2400 ntBASIC21.27■■□□□ 1
BCAS4Q8TDM0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
BCAS4Q8TDM0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
BCAS4Q8TDM0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
BCAS4Q8TDM0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCAS4Q8TDM0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms