Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.76■■□□□ 1.07
SIX5Q8N196 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.76■■□□□ 1.07
SIX5Q8N196 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.76■■□□□ 1.07
SIX5Q8N196 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.76■■□□□ 1.07
SIX5Q8N196 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.76■■□□□ 1.07
SIX5Q8N196 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.76■■□□□ 1.07
SIX5Q8N196 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.76■■□□□ 1.07
SIX5Q8N196 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SIX5Q8N196 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SIX5Q8N196 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.75■■□□□ 1.07
SIX5Q8N196 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.75■■□□□ 1.07
SIX5Q8N196 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.75■■□□□ 1.07
SIX5Q8N196 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SIX5Q8N196 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIX5Q8N196 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIX5Q8N196 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIX5Q8N196 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIX5Q8N196 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.75■■□□□ 1.07
SIX5Q8N196 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.75■■□□□ 1.07
SIX5Q8N196 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIX5Q8N196 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
SIX5Q8N196 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIX5Q8N196 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.75■■□□□ 1.07
SIX5Q8N196 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.75■■□□□ 1.07
SIX5Q8N196 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SIX5Q8N196 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.74■■□□□ 1.07
SIX5Q8N196 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
SIX5Q8N196 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SIX5Q8N196 UBE2SP1-201ENST00000450587 669 ntBASIC21.74■■□□□ 1.07
SIX5Q8N196 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.74■■□□□ 1.07
SIX5Q8N196 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.74■■□□□ 1.07
SIX5Q8N196 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.74■■□□□ 1.07
SIX5Q8N196 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.74■■□□□ 1.07
SIX5Q8N196 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIX5Q8N196 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SIX5Q8N196 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIX5Q8N196 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIX5Q8N196 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SIX5Q8N196 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIX5Q8N196 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.73■■□□□ 1.07
SIX5Q8N196 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.73■■□□□ 1.07
SIX5Q8N196 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.73■■□□□ 1.07
SIX5Q8N196 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.73■■□□□ 1.07
SIX5Q8N196 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SIX5Q8N196 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.73■■□□□ 1.07
SIX5Q8N196 LINC01124-201ENST00000409786 2117 ntBASIC21.73■■□□□ 1.07
SIX5Q8N196 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIX5Q8N196 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.72■■□□□ 1.07
SIX5Q8N196 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SIX5Q8N196 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.72■■□□□ 1.07
SIX5Q8N196 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX5Q8N196 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX5Q8N196 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.72■■□□□ 1.07
SIX5Q8N196 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.72■■□□□ 1.07
SIX5Q8N196 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX5Q8N196 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.72■■□□□ 1.07
SIX5Q8N196 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
SIX5Q8N196 AL591742.1-201ENST00000604433 565 ntBASIC21.72■■□□□ 1.07
SIX5Q8N196 AC008175.2-201ENST00000612840 297 ntBASIC21.72■■□□□ 1.07
SIX5Q8N196 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SIX5Q8N196 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SIX5Q8N196 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIX5Q8N196 OR7E47P-201ENST00000546390 1422 ntBASIC21.72■■□□□ 1.07
SIX5Q8N196 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SIX5Q8N196 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SIX5Q8N196 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SIX5Q8N196 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SIX5Q8N196 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.71■■□□□ 1.07
SIX5Q8N196 AL034346.1-201ENST00000568244 1277 ntBASIC21.71■■□□□ 1.07
SIX5Q8N196 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SIX5Q8N196 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.71■■□□□ 1.07
SIX5Q8N196 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX5Q8N196 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms