Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 AC034268.1-201ENST00000441047 882 ntBASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC28.19■■■□□ 2.1
CCDC146Q8IYE0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 GOLGA2P6-201ENST00000340929 2049 ntBASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC146Q8IYE0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC146Q8IYE0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 AP004607.4-201ENST00000530158 1459 ntBASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC146Q8IYE0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 KRT18P5-201ENST00000436075 1291 ntBASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 AL162430.1-201ENST00000480705 870 ntBASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC146Q8IYE0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 MIR5787-201ENST00000611784 55 ntBASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC146Q8IYE0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CCDC146Q8IYE0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CCDC146Q8IYE0 KRT87P-202ENST00000534226 1464 ntBASIC28.14■■■□□ 2.09
CCDC146Q8IYE0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 FXN-202ENST00000396364 980 ntTSL 5 BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 NTF6G-201ENST00000591094 616 ntBASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC146Q8IYE0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC28.12■■■□□ 2.09
CCDC146Q8IYE0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CCDC146Q8IYE0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC28.12■■■□□ 2.09
CCDC146Q8IYE0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC146Q8IYE0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.12■■■□□ 2.09
CCDC146Q8IYE0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.12■■■□□ 2.09
CCDC146Q8IYE0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC146Q8IYE0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC28.11■■■□□ 2.09
CCDC146Q8IYE0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC146Q8IYE0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC146Q8IYE0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms