Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FEM1AP1-201ENST00000431297 1995 ntBASIC21.08■□□□□ 0.96
TRIM42Q8IWZ5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM42Q8IWZ5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM42Q8IWZ5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM42Q8IWZ5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.08■□□□□ 0.96
TRIM42Q8IWZ5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM42Q8IWZ5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM42Q8IWZ5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 AC068587.7-201ENST00000641602 218 ntBASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRIM42Q8IWZ5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 AL391422.3-201ENST00000603791 2761 ntBASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 AC092028.1-203ENST00000608262 953 ntBASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM42Q8IWZ5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 MTDHP2-201ENST00000601468 714 ntBASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM42Q8IWZ5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 TSPY9P-201ENST00000440215 945 ntBASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 TSPY11P-201ENST00000442607 1045 ntBASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM42Q8IWZ5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM42Q8IWZ5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM42Q8IWZ5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms