Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 AC139530.1-201ENST00000575312 1977 ntBASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 SLC7A5P1-201ENST00000568957 537 ntBASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 AC083880.1-201ENST00000608266 535 ntBASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 AC080038.3-201ENST00000623346 1952 ntBASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI1Q7Z5J4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 AC016405.3-201ENST00000607710 860 ntBASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 AC133041.1-202ENST00000642053 222 ntBASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI1Q7Z5J4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 AC053503.5-201ENST00000601508 636 ntBASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI1Q7Z5J4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 GUSBP5-202ENST00000510805 1989 ntBASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms