Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 ZNRF2P3-201ENST00000424200 374 ntBASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 AC123595.1-201ENST00000440769 1046 ntBASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COLCA1Q6ZS62 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COLCA1Q6ZS62 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 EEF1DP3-203ENST00000566025 782 ntBASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 LINC02228-203ENST00000641970 1355 ntBASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLCA1Q6ZS62 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 YBX1P1-201ENST00000445822 960 ntBASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 AC053503.5-201ENST00000601508 636 ntBASIC18.27■□□□□ 0.52
COLCA1Q6ZS62 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.27■□□□□ 0.51
COLCA1Q6ZS62 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COLCA1Q6ZS62 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 FEM1AP4-201ENST00000443167 1987 ntBASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLCA1Q6ZS62 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COLCA1Q6ZS62 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms