Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NHLRC1Q6VVB1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 PKD1P6-201ENST00000343738 4769 ntBASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NHLRC1Q6VVB1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 IRS3P-201ENST00000223076 1006 ntBASIC19■□□□□ 0.63
NHLRC1Q6VVB1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 TPRG1LP1-201ENST00000598702 760 ntBASIC19■□□□□ 0.63
NHLRC1Q6VVB1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 AC005224.4-201ENST00000583262 1652 ntBASIC19■□□□□ 0.63
NHLRC1Q6VVB1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19■□□□□ 0.63
NHLRC1Q6VVB1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 AL354811.1-201ENST00000610286 706 ntBASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 AL358852.1-201ENST00000623174 1268 ntBASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NHLRC1Q6VVB1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NHLRC1Q6VVB1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms