Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 RARRES2P10-201ENST00000564312 460 ntBASIC11.53□□□□□ -0.56
RNF213Q63HN8 AC144652.1-201ENST00000609974 1624 ntBASIC11.53□□□□□ -0.56
RNF213Q63HN8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 AP000593.1-201ENST00000393668 712 ntBASIC11.53□□□□□ -0.56
RNF213Q63HN8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 AC010501.1-201ENST00000606270 1962 ntBASIC11.53□□□□□ -0.56
RNF213Q63HN8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 AL161729.1-201ENST00000604104 1402 ntBASIC11.53□□□□□ -0.56
RNF213Q63HN8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 AC104076.2-201ENST00000448912 469 ntBASIC11.53□□□□□ -0.56
RNF213Q63HN8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.53□□□□□ -0.56
RNF213Q63HN8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RNF213Q63HN8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RNF213Q63HN8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RNF213Q63HN8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RNF213Q63HN8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RNF213Q63HN8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RNF213Q63HN8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RNF213Q63HN8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RNF213Q63HN8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 AC113410.3-201ENST00000623366 203 ntBASIC11.52□□□□□ -0.57
RNF213Q63HN8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RNF213Q63HN8 LSM12P1-201ENST00000411836 588 ntBASIC11.52□□□□□ -0.57
RNF213Q63HN8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RNF213Q63HN8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 KRT17P3-201ENST00000420566 1262 ntBASIC11.52□□□□□ -0.57
RNF213Q63HN8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.52□□□□□ -0.57
RNF213Q63HN8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC006011.2-201ENST00000621313 1158 ntBASIC11.51□□□□□ -0.57
RNF213Q63HN8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 NME6-213ENST00000451657 871 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC010141.3-201ENST00000456659 717 ntBASIC11.51□□□□□ -0.57
RNF213Q63HN8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF213Q63HN8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF213Q63HN8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 CYP2D8P-201ENST00000433633 1490 ntBASIC11.5□□□□□ -0.57
RNF213Q63HN8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms