Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RIF1Q5UIP0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIF1Q5UIP0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RIF1Q5UIP0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIF1Q5UIP0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIF1Q5UIP0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 LSM12P1-201ENST00000411836 588 ntBASIC20.88■□□□□ 0.93
RIF1Q5UIP0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 EEF1DP3-203ENST00000566025 782 ntBASIC20.88■□□□□ 0.93
RIF1Q5UIP0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 NTF6B-201ENST00000591913 560 ntBASIC20.88■□□□□ 0.93
RIF1Q5UIP0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 AL355472.2-201ENST00000422958 438 ntBASIC20.88■□□□□ 0.93
RIF1Q5UIP0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 SOX15-203ENST00000570788 1093 ntBASIC20.88■□□□□ 0.93
RIF1Q5UIP0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 HLA-B-256ENST00000639848 1089 ntBASIC20.88■□□□□ 0.93
RIF1Q5UIP0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIF1Q5UIP0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 AC133681.1-201ENST00000465482 601 ntBASIC20.87■□□□□ 0.93
RIF1Q5UIP0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIF1Q5UIP0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 AC142086.6-201ENST00000621154 1765 ntBASIC20.86■□□□□ 0.93
RIF1Q5UIP0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.86■□□□□ 0.93
RIF1Q5UIP0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 MTDHP1-201ENST00000605323 784 ntBASIC20.85■□□□□ 0.93
RIF1Q5UIP0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RIF1Q5UIP0 AC079630.1-202ENST00000618127 1840 ntBASIC20.85■□□□□ 0.93
RIF1Q5UIP0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 TPM4P1-201ENST00000436100 807 ntBASIC20.84■□□□□ 0.93
RIF1Q5UIP0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 KRT16P2-201ENST00000414673 1423 ntBASIC20.84■□□□□ 0.93
RIF1Q5UIP0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.84■□□□□ 0.93
RIF1Q5UIP0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIF1Q5UIP0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIF1Q5UIP0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIF1Q5UIP0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms