Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.67■□□□□ 0.58
LRRK2Q5S007 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRK2Q5S007 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRK2Q5S007 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRK2Q5S007 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRK2Q5S007 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LRRK2Q5S007 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LRRK2Q5S007 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LRRK2Q5S007 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRK2Q5S007 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRK2Q5S007 DUSP8P3-201ENST00000399571 1760 ntBASIC18.65■□□□□ 0.58
LRRK2Q5S007 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRK2Q5S007 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
LRRK2Q5S007 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRK2Q5S007 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRK2Q5S007 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRK2Q5S007 TSPY15P-201ENST00000457163 923 ntBASIC18.65■□□□□ 0.58
LRRK2Q5S007 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRK2Q5S007 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRK2Q5S007 KRT17P1-201ENST00000399211 1546 ntBASIC18.64■□□□□ 0.58
LRRK2Q5S007 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRK2Q5S007 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRK2Q5S007 AL049597.2-201ENST00000565575 961 ntBASIC18.64■□□□□ 0.57
LRRK2Q5S007 AL591742.1-201ENST00000604433 565 ntBASIC18.64■□□□□ 0.57
LRRK2Q5S007 HLA-B-256ENST00000639848 1089 ntBASIC18.64■□□□□ 0.57
LRRK2Q5S007 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRRK2Q5S007 POM121L13P-201ENST00000422362 380 ntBASIC18.64■□□□□ 0.57
LRRK2Q5S007 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRK2Q5S007 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRK2Q5S007 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRK2Q5S007 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRK2Q5S007 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LRRK2Q5S007 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRK2Q5S007 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRK2Q5S007 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRK2Q5S007 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRK2Q5S007 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRK2Q5S007 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LRRK2Q5S007 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRK2Q5S007 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRK2Q5S007 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRK2Q5S007 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRRK2Q5S007 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRK2Q5S007 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRK2Q5S007 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRK2Q5S007 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRK2Q5S007 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRK2Q5S007 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRK2Q5S007 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 KRT17P3-201ENST00000420566 1262 ntBASIC18.62■□□□□ 0.57
LRRK2Q5S007 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRK2Q5S007 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRK2Q5S007 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRK2Q5S007 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.61■□□□□ 0.57
LRRK2Q5S007 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms