Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM60Q495X7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TRIM60Q495X7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TRIM60Q495X7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 LINC00526-201ENST00000581067 1875 ntBASIC23.48■■□□□ 1.35
TRIM60Q495X7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.48■■□□□ 1.35
TRIM60Q495X7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.48■■□□□ 1.35
TRIM60Q495X7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.48■■□□□ 1.35
TRIM60Q495X7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM60Q495X7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM60Q495X7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM60Q495X7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM60Q495X7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM60Q495X7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM60Q495X7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM60Q495X7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TRIM60Q495X7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM60Q495X7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.47■■□□□ 1.35
TRIM60Q495X7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM60Q495X7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.47■■□□□ 1.35
TRIM60Q495X7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM60Q495X7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
TRIM60Q495X7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM60Q495X7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.47■■□□□ 1.35
TRIM60Q495X7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TRIM60Q495X7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.46■■□□□ 1.35
TRIM60Q495X7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
TRIM60Q495X7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.46■■□□□ 1.35
TRIM60Q495X7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
TRIM60Q495X7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.46■■□□□ 1.35
TRIM60Q495X7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM60Q495X7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.46■■□□□ 1.35
TRIM60Q495X7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
TRIM60Q495X7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.35
TRIM60Q495X7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.45■■□□□ 1.35
TRIM60Q495X7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM60Q495X7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.45■■□□□ 1.34
TRIM60Q495X7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
TRIM60Q495X7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
TRIM60Q495X7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM60Q495X7 LSM12P1-201ENST00000411836 588 ntBASIC23.45■■□□□ 1.34
TRIM60Q495X7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.45■■□□□ 1.34
TRIM60Q495X7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.45■■□□□ 1.34
TRIM60Q495X7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.45■■□□□ 1.34
TRIM60Q495X7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM60Q495X7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM60Q495X7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM60Q495X7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM60Q495X7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM60Q495X7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.44■■□□□ 1.34
TRIM60Q495X7 POU5F1P4-201ENST00000413175 1085 ntBASIC23.44■■□□□ 1.34
TRIM60Q495X7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.44■■□□□ 1.34
TRIM60Q495X7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.44■■□□□ 1.34
TRIM60Q495X7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.44■■□□□ 1.34
TRIM60Q495X7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM60Q495X7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM60Q495X7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM60Q495X7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM60Q495X7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 ECEL1P3-201ENST00000427961 737 ntBASIC23.43■■□□□ 1.34
TRIM60Q495X7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM60Q495X7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.43■■□□□ 1.34
TRIM60Q495X7 AC008403.3-201ENST00000598924 454 ntBASIC23.43■■□□□ 1.34
TRIM60Q495X7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM60Q495X7 AC020928.2-201ENST00000588717 2197 ntBASIC23.42■■□□□ 1.34
TRIM60Q495X7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM60Q495X7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
TRIM60Q495X7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM60Q495X7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TRIM60Q495X7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM60Q495X7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM60Q495X7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM60Q495X7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM60Q495X7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM60Q495X7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.42■■□□□ 1.34
TRIM60Q495X7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.42■■□□□ 1.34
TRIM60Q495X7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM60Q495X7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM60Q495X7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms