Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA52P62987 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA52P62987 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.14■□□□□ 0.49
UBA52P62987 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA52P62987 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
UBA52P62987 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
UBA52P62987 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBA52P62987 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA52P62987 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA52P62987 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA52P62987 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.13■□□□□ 0.49
UBA52P62987 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.13■□□□□ 0.49
UBA52P62987 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.13■□□□□ 0.49
UBA52P62987 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA52P62987 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UBA52P62987 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.13■□□□□ 0.49
UBA52P62987 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
UBA52P62987 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.12■□□□□ 0.49
UBA52P62987 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.12■□□□□ 0.49
UBA52P62987 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBA52P62987 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UBA52P62987 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
UBA52P62987 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UBA52P62987 AL391422.3-201ENST00000603791 2761 ntBASIC18.12■□□□□ 0.49
UBA52P62987 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA52P62987 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
UBA52P62987 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 AC034268.1-201ENST00000441047 882 ntBASIC18.11■□□□□ 0.49
UBA52P62987 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.11■□□□□ 0.49
UBA52P62987 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBA52P62987 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.11■□□□□ 0.49
UBA52P62987 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.11■□□□□ 0.49
UBA52P62987 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.11■□□□□ 0.49
UBA52P62987 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBA52P62987 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBA52P62987 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA52P62987 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.1■□□□□ 0.49
UBA52P62987 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.1■□□□□ 0.49
UBA52P62987 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBA52P62987 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.1■□□□□ 0.49
UBA52P62987 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UBA52P62987 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
UBA52P62987 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UBA52P62987 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.1■□□□□ 0.49
UBA52P62987 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.1■□□□□ 0.49
UBA52P62987 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.1■□□□□ 0.49
UBA52P62987 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.1■□□□□ 0.49
UBA52P62987 AC126544.1-201ENST00000580842 1059 ntBASIC18.1■□□□□ 0.49
UBA52P62987 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.1■□□□□ 0.49
UBA52P62987 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.1■□□□□ 0.49
UBA52P62987 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
UBA52P62987 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBA52P62987 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.09■□□□□ 0.49
UBA52P62987 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
UBA52P62987 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.09■□□□□ 0.49
UBA52P62987 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.09■□□□□ 0.49
UBA52P62987 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms