Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RPL39P62891 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPL39P62891 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPL39P62891 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RPL39P62891 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPL39P62891 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPL39P62891 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RPL39P62891 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RPL39P62891 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.95□□□□□ -0.02
RPL39P62891 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RPL39P62891 OR7E47P-201ENST00000546390 1422 ntBASIC14.95□□□□□ -0.02
RPL39P62891 AL391422.3-201ENST00000603791 2761 ntBASIC14.95□□□□□ -0.02
RPL39P62891 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.95□□□□□ -0.02
RPL39P62891 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RPL39P62891 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.95□□□□□ -0.02
RPL39P62891 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.95□□□□□ -0.02
RPL39P62891 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.95□□□□□ -0.02
RPL39P62891 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.95□□□□□ -0.02
RPL39P62891 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL39P62891 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RPL39P62891 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RPL39P62891 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 AC007952.6-201ENST00000573168 2673 ntBASIC14.94□□□□□ -0.02
RPL39P62891 AC003957.1-201ENST00000625108 2673 ntBASIC14.94□□□□□ -0.02
RPL39P62891 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPL39P62891 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 AL049796.1-201ENST00000565336 1766 ntBASIC14.94□□□□□ -0.02
RPL39P62891 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPL39P62891 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 YBX1P4-201ENST00000392794 808 ntBASIC14.94□□□□□ -0.02
RPL39P62891 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RPL39P62891 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.94□□□□□ -0.02
RPL39P62891 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RPL39P62891 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPL39P62891 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL39P62891 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL39P62891 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.93□□□□□ -0.02
RPL39P62891 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL39P62891 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL39P62891 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL39P62891 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.93□□□□□ -0.02
RPL39P62891 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL39P62891 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL39P62891 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPL39P62891 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL39P62891 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.93□□□□□ -0.02
RPL39P62891 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.93□□□□□ -0.02
RPL39P62891 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.93□□□□□ -0.02
RPL39P62891 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.93□□□□□ -0.02
RPL39P62891 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.92□□□□□ -0.02
RPL39P62891 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RPL39P62891 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL39P62891 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL39P62891 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.92□□□□□ -0.02
RPL39P62891 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL39P62891 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPL39P62891 AL499627.2-201ENST00000606283 725 ntBASIC14.92□□□□□ -0.02
RPL39P62891 AC021242.3-201ENST00000607598 1377 ntBASIC14.92□□□□□ -0.02
RPL39P62891 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL39P62891 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPL39P62891 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
RPL39P62891 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.92□□□□□ -0.02
RPL39P62891 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RPL39P62891 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RPL39P62891 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RPL39P62891 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.92□□□□□ -0.02
RPL39P62891 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL39P62891 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RPL39P62891 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RPL39P62891 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.91□□□□□ -0.02
RPL39P62891 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms