Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42P60953 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42P60953 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42P60953 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDC42P60953 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42P60953 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CDC42P60953 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CDC42P60953 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42P60953 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42P60953 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42P60953 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDC42P60953 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42P60953 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42P60953 MTDHP2-201ENST00000601468 714 ntBASIC19.34■□□□□ 0.69
CDC42P60953 AC092028.1-203ENST00000608262 953 ntBASIC19.34■□□□□ 0.69
CDC42P60953 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42P60953 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42P60953 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.33■□□□□ 0.69
CDC42P60953 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDC42P60953 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42P60953 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42P60953 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42P60953 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
CDC42P60953 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.33■□□□□ 0.68
CDC42P60953 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42P60953 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42P60953 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CDC42P60953 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42P60953 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDC42P60953 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42P60953 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDC42P60953 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.32■□□□□ 0.68
CDC42P60953 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDC42P60953 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC42P60953 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDC42P60953 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42P60953 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CDC42P60953 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC42P60953 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.31■□□□□ 0.68
CDC42P60953 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDC42P60953 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDC42P60953 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42P60953 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.31■□□□□ 0.68
CDC42P60953 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.31■□□□□ 0.68
CDC42P60953 AL033527.3-201ENST00000566366 1196 ntBASIC19.31■□□□□ 0.68
CDC42P60953 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CDC42P60953 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.31■□□□□ 0.68
CDC42P60953 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.31■□□□□ 0.68
CDC42P60953 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42P60953 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CDC42P60953 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CDC42P60953 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDC42P60953 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDC42P60953 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.3■□□□□ 0.68
CDC42P60953 AC068587.7-201ENST00000641602 218 ntBASIC19.3■□□□□ 0.68
CDC42P60953 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDC42P60953 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC42P60953 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC42P60953 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42P60953 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms