Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
DEFA3P59666 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEFA3P59666 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
DEFA3P59666 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
DEFA3P59666 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
DEFA3P59666 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
DEFA3P59666 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DEFA3P59666 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEFA3P59666 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEFA3P59666 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEFA3P59666 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.62■□□□□ 0.57
DEFA3P59666 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEFA3P59666 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEFA3P59666 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DEFA3P59666 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.61■□□□□ 0.57
DEFA3P59666 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DEFA3P59666 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.61■□□□□ 0.57
DEFA3P59666 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEFA3P59666 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DEFA3P59666 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.6■□□□□ 0.57
DEFA3P59666 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.6■□□□□ 0.57
DEFA3P59666 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DEFA3P59666 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.6■□□□□ 0.57
DEFA3P59666 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.6■□□□□ 0.57
DEFA3P59666 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.6■□□□□ 0.57
DEFA3P59666 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DEFA3P59666 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.6■□□□□ 0.57
DEFA3P59666 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
DEFA3P59666 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DEFA3P59666 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.59■□□□□ 0.57
DEFA3P59666 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.59■□□□□ 0.57
DEFA3P59666 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DEFA3P59666 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.59■□□□□ 0.57
DEFA3P59666 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DEFA3P59666 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.59■□□□□ 0.57
DEFA3P59666 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.59■□□□□ 0.57
DEFA3P59666 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DEFA3P59666 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DEFA3P59666 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DEFA3P59666 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.58■□□□□ 0.57
DEFA3P59666 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DEFA3P59666 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.58■□□□□ 0.57
DEFA3P59666 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DEFA3P59666 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
DEFA3P59666 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.58■□□□□ 0.56
DEFA3P59666 RP9P-202ENST00000450133 1212 ntBASIC18.58■□□□□ 0.56
DEFA3P59666 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
DEFA3P59666 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
DEFA3P59666 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.58■□□□□ 0.56
DEFA3P59666 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DEFA3P59666 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.58■□□□□ 0.56
DEFA3P59666 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
DEFA3P59666 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DEFA3P59666 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.58■□□□□ 0.56
DEFA3P59666 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DEFA3P59666 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DEFA3P59666 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DEFA3P59666 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.58■□□□□ 0.56
DEFA3P59666 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DEFA3P59666 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DEFA3P59666 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DEFA3P59666 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.57■□□□□ 0.56
DEFA3P59666 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
DEFA3P59666 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DEFA3P59666 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DEFA3P59666 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DEFA3P59666 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms