Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN12P56749 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CLDN12P56749 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CLDN12P56749 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLDN12P56749 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN12P56749 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLDN12P56749 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN12P56749 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN12P56749 AL451085.2-201ENST00000605085 799 ntBASIC18.39■□□□□ 0.53
CLDN12P56749 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 AL049796.1-201ENST00000565336 1766 ntBASIC18.39■□□□□ 0.53
CLDN12P56749 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN12P56749 PCDHAC2-203ENST00000615316 3011 ntBASIC18.39■□□□□ 0.53
CLDN12P56749 OXCT2P1-201ENST00000447263 1535 ntBASIC18.39■□□□□ 0.53
CLDN12P56749 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
CLDN12P56749 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN12P56749 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN12P56749 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN12P56749 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CLDN12P56749 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.38■□□□□ 0.53
CLDN12P56749 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN12P56749 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 AL391422.3-201ENST00000603791 2761 ntBASIC18.37■□□□□ 0.53
CLDN12P56749 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLDN12P56749 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN12P56749 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN12P56749 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN12P56749 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN12P56749 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 AC133637.1-201ENST00000624115 1537 ntBASIC18.37■□□□□ 0.53
CLDN12P56749 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN12P56749 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN12P56749 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLDN12P56749 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN12P56749 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN12P56749 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN12P56749 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN12P56749 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN12P56749 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN12P56749 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN12P56749 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN12P56749 KRT125P-201ENST00000546827 989 ntBASIC18.36■□□□□ 0.53
CLDN12P56749 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLDN12P56749 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN12P56749 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN12P56749 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLDN12P56749 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN12P56749 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN12P56749 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN12P56749 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN12P56749 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN12P56749 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN12P56749 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN12P56749 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.35■□□□□ 0.53
CLDN12P56749 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN12P56749 AC010997.5-201ENST00000609182 354 ntBASIC18.35■□□□□ 0.53
CLDN12P56749 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN12P56749 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN12P56749 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms