Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
WNT3AP56704 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
WNT3AP56704 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.45■■□□□ 1.02
WNT3AP56704 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
WNT3AP56704 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.45■■□□□ 1.02
WNT3AP56704 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.45■■□□□ 1.02
WNT3AP56704 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.45■■□□□ 1.02
WNT3AP56704 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
WNT3AP56704 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.45■■□□□ 1.02
WNT3AP56704 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.45■■□□□ 1.02
WNT3AP56704 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.45■■□□□ 1.02
WNT3AP56704 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
WNT3AP56704 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.44■■□□□ 1.02
WNT3AP56704 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
WNT3AP56704 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.44■■□□□ 1.02
WNT3AP56704 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.44■■□□□ 1.02
WNT3AP56704 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.44■■□□□ 1.02
WNT3AP56704 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
WNT3AP56704 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3AP56704 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.44■■□□□ 1.02
WNT3AP56704 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3AP56704 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.43■■□□□ 1.02
WNT3AP56704 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3AP56704 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.43■■□□□ 1.02
WNT3AP56704 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.43■■□□□ 1.02
WNT3AP56704 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.43■■□□□ 1.02
WNT3AP56704 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3AP56704 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3AP56704 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3AP56704 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3AP56704 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3AP56704 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3AP56704 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3AP56704 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.42■■□□□ 1.02
WNT3AP56704 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.42■■□□□ 1.02
WNT3AP56704 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.42■■□□□ 1.02
WNT3AP56704 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.42■■□□□ 1.02
WNT3AP56704 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
WNT3AP56704 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.42■■□□□ 1.02
WNT3AP56704 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3AP56704 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.42■■□□□ 1.02
WNT3AP56704 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
WNT3AP56704 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.41■■□□□ 1.02
WNT3AP56704 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
WNT3AP56704 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.41■■□□□ 1.02
WNT3AP56704 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
WNT3AP56704 LINC02228-203ENST00000641970 1355 ntBASIC21.41■■□□□ 1.02
WNT3AP56704 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
WNT3AP56704 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.41■■□□□ 1.02
WNT3AP56704 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
WNT3AP56704 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3AP56704 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3AP56704 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3AP56704 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.4■■□□□ 1.02
WNT3AP56704 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
WNT3AP56704 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3AP56704 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.4■■□□□ 1.02
WNT3AP56704 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.4■■□□□ 1.02
WNT3AP56704 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
WNT3AP56704 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3AP56704 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.4■■□□□ 1.02
WNT3AP56704 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.4■■□□□ 1.02
WNT3AP56704 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
WNT3AP56704 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.39■■□□□ 1.02
WNT3AP56704 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
WNT3AP56704 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
WNT3AP56704 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.39■■□□□ 1.02
WNT3AP56704 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
WNT3AP56704 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3AP56704 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3AP56704 AC123595.1-201ENST00000440769 1046 ntBASIC21.39■■□□□ 1.01
WNT3AP56704 YBX1P1-201ENST00000445822 960 ntBASIC21.39■■□□□ 1.01
WNT3AP56704 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.39■■□□□ 1.01
WNT3AP56704 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.39■■□□□ 1.01
WNT3AP56704 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3AP56704 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3AP56704 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms