Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.223e-6■■■■■ 27.2
SUB1P53999 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.223e-6■■■■■ 27.2
SUB1P53999 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.68□□□□□ -0.383e-6■■■■■ 27.2
SUB1P53999 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.61□□□□□ -0.393e-6■■■■■ 27.2
SUB1P53999 TOM1-203ENST00000404284 2622 ntTSL 212.6□□□□□ -0.393e-6■■■■■ 27.2
SUB1P53999 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12□□□□□ -0.493e-6■■■■■ 27.2
SUB1P53999 ZNHIT1-203ENST00000485387 2898 ntTSL 1 (best)10.64□□□□□ -0.712e-6■■■■■ 27.2
SUB1P53999 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.68■□□□□ 0.17e-12■■■■■ 27.2
SUB1P53999 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.26□□□□□ -0.134e-6■■■■■ 27.2
SUB1P53999 NUDT16L1-205ENST00000590460 709 ntTSL 313.9□□□□□ -0.184e-6■■■■■ 27.2
SUB1P53999 BZW2-209ENST00000437745 1711 ntTSL 1 (best)11.26□□□□□ -0.612e-11■■■■■ 27.2
SUB1P53999 BZW2-214ENST00000630952 1721 ntTSL 5 BASIC9.16□□□□□ -0.942e-11■■■■■ 27.2
SUB1P53999 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC7.84□□□□□ -1.152e-11■■■■■ 27.2
SUB1P53999 BZW2-202ENST00000405202 1689 ntTSL 5 BASIC7.78□□□□□ -1.162e-11■■■■■ 27.2
SUB1P53999 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.182e-11■■■■■ 27.2
SUB1P53999 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.192e-11■■■■■ 27.2
SUB1P53999 BZW2-208ENST00000436868 1784 ntTSL 56.89□□□□□ -1.312e-11■■■■■ 27.2
SUB1P53999 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.451e-8■■■■■ 27.2
SUB1P53999 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.012e-10■■■■■ 27.2
SUB1P53999 TBL3-202ENST00000561907 518 ntTSL 213.96□□□□□ -0.172e-10■■■■■ 27.2
SUB1P53999 TBL3-206ENST00000569628 2594 ntTSL 213.12□□□□□ -0.312e-10■■■■■ 27.2
SUB1P53999 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.48□□□□□ -0.572e-10■■■■■ 27.2
SUB1P53999 MTCH2-205ENST00000534074 811 ntTSL 24.27□□□□□ -1.731e-8■■■■■ 27.2
SUB1P53999 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.564e-8■■■■■ 27.2
SUB1P53999 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.034e-8■■■■■ 27.2
SUB1P53999 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.684e-8■■■■■ 27.2
SUB1P53999 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.42□□□□□ -0.423e-10■■■■■ 27.2
SUB1P53999 PPIF-202ENST00000448165 821 ntTSL 211.5□□□□□ -0.571e-6■■■■■ 27.2
SUB1P53999 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.172e-6■■■■■ 27.2
SUB1P53999 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.297e-9■■■■■ 27.1
SUB1P53999 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.061e-10■■■■■ 27.1
SUB1P53999 NCAPD3-213ENST00000534532 5539 ntTSL 214.31□□□□□ -0.121e-10■■■■■ 27.1
SUB1P53999 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.05□□□□□ -0.161e-10■■■■■ 27.1
SUB1P53999 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.211e-10■■■■■ 27.1
SUB1P53999 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.231e-10■■■■■ 27.1
SUB1P53999 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.44□□□□□ -0.261e-10■■■■■ 27.1
SUB1P53999 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.17□□□□□ -0.31e-10■■■■■ 27.1
SUB1P53999 NBAS-202ENST00000417461 1330 ntTSL 212.67□□□□□ -0.381e-10■■■■■ 27.1
SUB1P53999 NCAPD3-205ENST00000526787 1226 ntTSL 312.65□□□□□ -0.381e-10■■■■■ 27.1
SUB1P53999 NEIL2-205ENST00000524741 1482 ntTSL 212.37□□□□□ -0.431e-10■■■■■ 27.1
SUB1P53999 NBAS-209ENST00000485694 1798 ntTSL 212.27□□□□□ -0.451e-10■■■■■ 27.1
SUB1P53999 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.1□□□□□ -0.471e-10■■■■■ 27.1
SUB1P53999 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.481e-10■■■■■ 27.1
SUB1P53999 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.1□□□□□ -0.631e-10■■■■■ 27.1
SUB1P53999 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC10.15□□□□□ -0.781e-10■■■■■ 27.1
SUB1P53999 PPIA-208ENST00000489459 907 ntTSL 2 BASIC10.15□□□□□ -0.781e-10■■■■■ 27.1
SUB1P53999 PPIA-210ENST00000620047 827 ntTSL 5 BASIC10.15□□□□□ -0.781e-10■■■■■ 27.1
SUB1P53999 NBAS-206ENST00000433283 687 ntTSL 210.03□□□□□ -0.81e-10■■■■■ 27.1
SUB1P53999 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC9.69□□□□□ -0.861e-10■■■■■ 27.1
SUB1P53999 NBAS-208ENST00000442506 4391 ntTSL 1 (best)9.62□□□□□ -0.871e-10■■■■■ 27.1
SUB1P53999 NCAPD3-214ENST00000534548 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.991e-10■■■■■ 27.1
SUB1P53999 PPIA-202ENST00000415933 863 ntTSL 26.98□□□□□ -1.291e-10■■■■■ 27.1
SUB1P53999 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.371e-10■■■■■ 27.1
SUB1P53999 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.671e-10■■■■■ 27.1
SUB1P53999 DNAH14-213ENST00000453375 456 ntTSL 24.54□□□□□ -1.681e-10■■■■■ 27.1
SUB1P53999 PPIA-207ENST00000481437 570 ntTSL 24.48□□□□□ -1.691e-10■■■■■ 27.1
SUB1P53999 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.03□□□□□ -1.761e-10■■■■■ 27.1
SUB1P53999 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.24□□□□□ -1.891e-10■■■■■ 27.1
SUB1P53999 DNAH14-209ENST00000433124 589 ntTSL 32.78□□□□□ -1.961e-10■■■■■ 27.1
SUB1P53999 DNAH14-214ENST00000474127 773 ntTSL 32.55□□□□□ -21e-10■■■■■ 27.1
SUB1P53999 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.051e-10■■■■■ 27.1
SUB1P53999 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.472e-18■■■■■ 27.1
SUB1P53999 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.673e-10■■■■■ 27
SUB1P53999 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC9.26□□□□□ -0.933e-10■■■■■ 27
SUB1P53999 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC9.09□□□□□ -0.953e-10■■■■■ 27
SUB1P53999 TPT1-206ENST00000484604 794 ntTSL 26.3□□□□□ -1.43e-10■■■■■ 27
SUB1P53999 TPT1-210ENST00000529421 801 ntTSL 35.61□□□□□ -1.513e-10■■■■■ 27
SUB1P53999 TPT1-209ENST00000528619 731 ntTSL 25.3□□□□□ -1.563e-10■■■■■ 27
SUB1P53999 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.493e-9■■■■■ 27
SUB1P53999 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.714e-9■■■■■ 26.9
SUB1P53999 GLO1-202ENST00000470973 1939 ntTSL 25.87□□□□□ -1.474e-9■■■■■ 26.9
SUB1P53999 TMBIM6-219ENST00000549471 484 ntTSL 23.33□□□□□ -1.886e-13■■■■■ 26.9
SUB1P53999 RPS23-207ENST00000511844 530 ntTSL 2 BASIC10.26□□□□□ -0.771e-33■■■■■ 26.9
SUB1P53999 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.014e-7■■■■■ 26.9
SUB1P53999 RAC3-204ENST00000585014 798 ntTSL 214.37□□□□□ -0.114e-7■■■■■ 26.9
SUB1P53999 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.556e-7■■■■■ 26.8
SUB1P53999 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.86e-7■■■■■ 26.8
SUB1P53999 CRIPT-202ENST00000486447 1724 ntTSL 515.31■□□□□ 0.045e-14■■■■■ 26.8
SUB1P53999 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.325e-14■■■■■ 26.8
SUB1P53999 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.127e-7■■■■□ 26.7
SUB1P53999 GRHPR-203ENST00000460882 1080 ntTSL 1 (best)12.26□□□□□ -0.454e-15■■■■□ 26.7
SUB1P53999 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC10.44□□□□□ -0.747e-7■■■■□ 26.7
SUB1P53999 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC9.4□□□□□ -0.97e-7■■■■□ 26.7
SUB1P53999 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.361e-6■■■■□ 26.7
SUB1P53999 MMADHC-201ENST00000303319 1436 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.031e-6■■■■□ 26.7
SUB1P53999 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC6.42□□□□□ -1.381e-6■■■■□ 26.7
SUB1P53999 UBC-208ENST00000540700 627 ntTSL 212.81□□□□□ -0.361e-34■■■■□ 26.7
SUB1P53999 RHOA-203ENST00000422781 961 ntTSL 2 BASIC7.93□□□□□ -1.146e-7■■■■□ 26.7
SUB1P53999 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.312e-6■■■■□ 26.7
SUB1P53999 OGT-210ENST00000488174 7243 ntTSL 55.46□□□□□ -1.542e-6■■■■□ 26.7
SUB1P53999 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.572e-6■■■■□ 26.7
SUB1P53999 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.183e-7■■■■□ 26.7
SUB1P53999 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.88□□□□□ -0.353e-7■■■■□ 26.7
SUB1P53999 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC10.44□□□□□ -0.743e-7■■■■□ 26.7
SUB1P53999 GAS6-202ENST00000476291 537 ntTSL 215.87■□□□□ 0.133e-7■■■■□ 26.6
SUB1P53999 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.063e-7■■■■□ 26.6
SUB1P53999 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.372e-8■■■■□ 26.6
SUB1P53999 PSMF1-204ENST00000381898 642 ntTSL 311.32□□□□□ -0.62e-8■■■■□ 26.6
SUB1P53999 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.042e-8■■■■□ 26.6
SUB1P53999 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.172e-8■■■■□ 26.6
Retrieved 100 of 11,644 protein–RNA pairs in 107.9 ms